Deep generative priors for 3D brain analysis
Published in arXiv, 2025
Recommended citation: Aguila, A. L., Zemlyanker, D., Cheng, Y., Das, S., Alexander, D. C., Puonti, O., Sorby-Adams, A., Kimberly, W. T., & Iglesias, J. E. (2025). Deep generative priors for 3D brain analysis. arXiv:2510.15119.
We introduce diffusion models as general-purpose priors for solving a wide range of medical imaging inverse problems in brain MRI analysis. A score-based diffusion prior is trained extensively on diverse brain MRI data and paired with flexible forward models to tackle tasks including super-resolution, bias field correction, and inpainting. The framework also refines outputs from existing deep learning methods. Testing on clinical and research MRI datasets demonstrated state-of-the-art performance producing consistent, high-quality solutions without requiring paired training datasets, highlighting the potential of diffusion models as versatile tools for 3D brain MRI analysis.
